# Ecological Trajectory Analysis

## Documentation for package ‘ecotraj’ version 1.2.0

- DESCRIPTION file.
- Package NEWS.

## Help Pages

avoca | Avoca permanent plot dataset
avoca_sites | Avoca permanent plot dataset
avoca_strat | Avoca permanent plot dataset
avoca_surveys | Avoca permanent plot dataset
centerTrajectories | Transform trajectories
compareToStateEnvelope | Ecological quality assessment
compareToTrajectoryEnvelope | Ecological quality assessment
cycleConvexity | Functions for Cyclical Ecological Trajectory Analysis
cycleMetrics | Functions for Cyclical Ecological Trajectory Analysis
cyclePCoA | Cyclical trajectory plots
cycles | Functions for Cyclical Ecological Trajectory Analysis
cycleShiftArrows | Displaying cycle shifts
cycleShifts | Functions for Cyclical Ecological Trajectory Analysis
defineTrajectories | Trajectory definition
dynamicVariation | Dynamic variation and variation decomposition
extractCycles | Functions for Cyclical Ecological Trajectory Analysis
extractFixedDateTrajectories | Functions for Cyclical Ecological Trajectory Analysis
fd.trajectories | Functions for Cyclical Ecological Trajectory Analysis
fixedDateTrajectoryPCoA | Cyclical trajectory plots
furseals | furseals dataset
glenan | Glenan dataset
glomel | Glomel vegetation dataset
heatmapdata | heatmapdata dataset
interpolateTrajectories | Transform trajectories
is.metric | Metricity
is.synchronous | Synchronicity in trajectory observations
isoscape | isoscape dataset
northseaZoo | North Sea zooplankton dataset
pike | pike dataset
referenceEnvelopes | Ecological quality assessment
RTMA | Relative Trajectory Movement Assessment (RTMA)
segmentDistances | Trajectory comparison
smoothTrajectories | Transform trajectories
stateEnvelopeVariability | Ecological quality assessment
subsetTrajectories | Trajectory subsetting
trajectories | Trajectory definition
trajectoryAngles | Trajectory metrics
trajectoryAngles2D | Trajectory metrics
trajectoryComparison | Trajectory comparison
trajectoryConvergence | Trajectory comparison
trajectoryConvergencePlot | Summary plot for trajectory convergence and divergence
trajectoryCorrespondence | Trajectory comparison
trajectoryCyclical | Functions for Cyclical Ecological Trajectory Analysis
trajectoryCyclicalPlots | Cyclical trajectory plots
trajectoryDirectionality | Trajectory metrics
trajectoryDistances | Trajectory comparison
trajectoryEnvelopeVariability | Ecological quality assessment
trajectoryInternalVariation | Trajectory metrics
trajectoryLengths | Trajectory metrics
trajectoryLengths2D | Trajectory metrics
trajectoryMetrics | Trajectory metrics
trajectoryPCoA | Trajectory plots
trajectoryPlot | Trajectory plots
trajectoryProjection | Trajectory projection
trajectoryRMA | Relative Trajectory Movement Assessment (RTMA)
trajectoryRMAPlot | Heat map-like plots for Relative Trajectory Movement Assessment (RTMA)
trajectoryShifts | Trajectory comparison
trajectorySpeeds | Trajectory metrics
trajectorySpeeds2D | Trajectory metrics
trajectoryWindowMetrics | Trajectory metrics
transformTrajectories | Transform trajectories
variationDecomposition | Dynamic variation and variation decomposition